Biochemistry and Molecular Biology

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Biochemistry and Molecular Biology	265 records found 1 - 25	Search took 0.42 seconds.

1.	Multiple Files Ligand-induced-segregation-from-large-cell-surface-phosphatases-is-a-critical-step-in-γδ-TCR-triggering Ligand-induced segregation from large cell-surface phosphatases is a critical step in γδ TCR triggering Li, Fenglei ; Roy, Sobhan ; Niculcea, Jacob ; Gould, Keith ; Adams, Erin J. ; van der Merwe, P.[...] Gamma/delta (γδ) T cells are unconventional lymphocytes that recognize diverse ligands via somatically recombined T cell antigen receptors (γδ TCRs). The molecular me [...] 13 September 2024 \| Biochemistry and Molecular Biology \| Article \| Detailed record - Similar records
2.	PDF bedrov-et-al-2019-molecular-dynamics-simulations-of-ionic-liquids-and-electrolytes-using-polarizable-force-fields Molecular Dynamics Simulations of Ionic Liquids and Electrolytes Using Polarizable Force Fields Bedrov, Dmitry ; Piquemal, Jean-Philip ; Borodin, Oleg ; MacKerell, Alexander D. ; Roux, Ben[...] Many applications in chemistry, biology, and energy storage/conversion research rely on molecular simulations to provide fundamental insight into structural and transport [...] 29 May 2019 \| Biochemistry and Molecular Biology \| Article \| Detailed record - Similar records
3.	PDF zayner-et-al-2019-helical-contributions-mediate-light-activated-conformational-change-in-the-lov2-domain-of-avena Helical Contributions Mediate Light-Activated Conformational Change in the LOV2 Domain of <i>Avena sativa</i> Phototropin 1 Zayner, Josiah P. ; Mathes, Tilo ; Sosnick, Tobin R. ; Kennis, John T. M. Algae, plants, bacteria, and fungi contain flavin-binding light-oxygen-voltage (LOV) domains that function as blue light sensors to control cellular responses to light. I [...] 15 January 2019 \| Biochemistry and Molecular Biology \| Article \| Detailed record - Similar records
4.	Multiple Files ji-et-al-2024-nanocavity-mediated-purcell-enhancement-of-er-in-tio2-thin-films-grown-via-atomic-layer-deposition Nanocavity-Mediated Purcell Enhancement of Er in TiO<sub>2</sub> Thin Films Grown via Atomic Layer Deposition Ji, Cheng ; Solomon, Michael T. ; Grant, Gregory D. ; Tanaka, Koichi ; Hua, Muchuan ; Wen, Jian[...] The use of trivalent erbium (Er³⁺), typically embedded as an atomic defect in the solid-state, has widespread adoption as a dopant in telecommunication devices [...] 27 March 2024 \| Biochemistry and Molecular Biology; Biophysical Sciences \| Article \| Detailed record - Similar records
5.	Multiple Files Solvent-organization-in-the-ultrahigh-resolution-crystal-structure-of-crambin-at-room-temperature Solvent organization in the ultrahigh-resolution crystal structure of crambin at room temperature Chen, Julian C.-H. ; Gilski, Miroslaw ; Chang, Changsoo ; Borek, Dominika ; Rosenbaum, Gerd ; L[...] Using synchrotron radiation, diffraction data extending to 0.70 Å resolution were collected from crystals of the small protein crambin at room temperature (297 K) [...] 27 August 2024 \| Biochemistry and Molecular Biology \| Article \| Detailed record - Similar records
6.	Multiple Files Potassium-dependent-structural-changes-in-the-selectivity-filter-of-HERG-potassium-channels Potassium dependent structural changes in the selectivity filter of HERG potassium channels Lau, Carus H. Y. ; Flood, Emelie ; Hunter, Mark J. ; Williams-Noonan, Billy J. ; Corbett, Ka[...] The fine tuning of biological electrical signaling is mediated by variations in the rates of opening and closing of gates that control ion flux through different ion chan [...] 29 August 2024 \| Biochemistry and Molecular Biology \| Article \| Detailed record - Similar records
7.	Multiple Files IGF2BP3-promotes-mRNA-degradation-through-internal-m7G-modification IGF2BP3 promotes mRNA degradation through internal m<sup>7</sup>G modification Liu, Chang ; Dou, Xiaoyang ; Zhao, Yutao ; Zhang, Linda ; Zhang, Lisheng ; Dai, Qing ; Liu, Jun ; Wu,[...] Recent studies have suggested that mRNA internal m⁷G and its writer protein METTL1 are closely related to cell metabolism and cancer regulation. Here, we ident [...] 28 August 2024 \| Biochemistry and Molecular Biology; Chemistry \| Article \| Detailed record - Similar records
8.	Multiple Files radakovic-et-al-2024-a-potential-role-for-rna-aminoacylation-prior-to-its-role-in-peptide-synthesis A potential role for RNA aminoacylation prior to its role in peptide synthesis Radakovic, Aleksandar ; Lewicka, Anna ; Todisco, Marco ; Aitken, Harry R. M. ; Weiss, Zoe ; Kim[...] Coded ribosomal peptide synthesis could not have evolved unless its sequence and amino acid–specific aminoacylated tRNA substrates already existed. We therefore wondere [...] 23 August 2024 \| Biochemistry and Molecular Biology; Chemistry \| Article \| Detailed record - Similar records
9.	Multiple Files Probing-the-formation-of-a-hetero-dimeric-membrane-transport-complex Probing the formation of a hetero-dimeric membrane transport complex with dual <i>in vitro</i> and <i>in silico</i> mutagenesis Rathod, Nishadh ; Lemieux, M. Joanne ; Chipot, Christophe ; Roux, BenoÎt ; Young, Howard S. The reversible association of transmembrane helices is a fundamental mechanism in how living cells convey information and respond to physiological events. The cardiac cal [...] 06 August 2024 \| Biochemistry and Molecular Biology \| Article \| Detailed record - Similar records
10.	Multiple Files Quantitative-analysis-of-cis-regulatory-elements-in-transcription-with-KAS-ATAC-seq Quantitative analysis of cis-regulatory elements in transcription with KAS-ATAC-seq Lyu, Ruitu ; Gao, Yun ; Wu, Tong ; Ye, Chang ; Wang, Pingluan ; He, Chuan Cis-regulatory elements (CREs) are pivotal in orchestrating gene expression throughout diverse biological systems. Accurate identification and in-depth characterization o [...] 10 August 2024 \| Biochemistry and Molecular Biology; Chemistry \| Article \| Detailed record - Similar records
11.	Multiple Files Translational-T-box-riboswitches-bind-tRNA-by-modulating-conformational-flexibility Translational T-box riboswitches bind tRNA by modulating conformational flexibility Campos-Chavez, Eduardo ; Paul, Sneha ; Zhou, Zunwu ; Alonso, Dulce ; Verma, Anjali R. ; Fei, Ji[...] T-box riboswitches are noncoding RNA elements involved in genetic regulation of most Gram-positive bacteria. They regulate amino acid metabolism by assessing the aminoacy [...] 03 August 2024 \| Biochemistry and Molecular Biology \| Article \| Detailed record - Similar records
12.	Multiple Files Wong_Hickernell_Thesis_final_updated_20240809 Toward a Deeper Understanding and Appreciation of Stress-Induced Biomolecular Condensation Wong Hickernell, Caitlin Joy When cells experience stress, they undergo a number of dramatic intracellular molecular changes. One of these changes is the formation of biomolecular condensates, or [...] 2024-08 \| Biochemistry and Molecular Biology \| Dissertation \| Detailed record - Similar records
13.	Multiple Files Revealing-reaction-intermediates-in-one-carbon-elongation Revealing reaction intermediates in one-carbon elongation by thiamine diphosphate/CoA-dependent enzyme family Kim, Youngchang ; Lee, Seung Hwan ; Gade, Priyanka ; Nattermann, Maren ; Maltseva, Natalia ; En[...] 2-Hydroxyacyl-CoA lyase/synthase (HACL/S) is a thiamine diphosphate (ThDP)-dependent versatile enzyme originally discovered in the mammalian α-oxidation pathway. HACL/S [...] 21 July 2024 \| Biochemistry and Molecular Biology \| Article \| Detailed record - Similar records
14.	Multiple Files elife-95814-v1 Structural analysis of the dynamic ribosome-translocon complex Lewis, Aaron J. O. ; Zhong, Frank ; Keenan, Robert J. ; Hegde, Ramanujan S. The protein translocon at the endoplasmic reticulum comprises the Sec61 translocation channel and numerous accessory factors that collectively facilitate the biogenesis o [...] 18 June 2024 \| Biochemistry and Molecular Biology; Molecular Genetics and Cell Biology \| Article \| Detailed record - Similar records
15.	Multiple Files Native-mass-spectrometry-and-structural-studies-reveal-modulation-of-MsbA-nucleotide-interactions-by-lipids Native mass spectrometry and structural studies reveal modulation of MsbA–nucleotide interactions by lipids Zhang, Tianqi ; Lyu, Jixing ; Yang, Bowei ; Yun, Sangho D. ; Scott, Elena ; Zhao, Minglei ; Lagano[...] The ATP-binding cassette (ABC) transporter, MsbA, plays a pivotal role in lipopolysaccharide (LPS) biogenesis by facilitating the transport of the LPS precursor lipooligo [...] 15 July 2024 \| Biochemistry and Molecular Biology \| Article \| Detailed record - Similar records
16.	Multiple Files Quantitative-profiling-of-m6A-at-single-base-resolution-across-the-life-cycle-of-rice-and-Arabidopsis Quantitative profiling of m<sup>6</sup>A at single base resolution across the life cycle of rice and <i>Arabidopsis</i> Wang, Guanqun ; Li, Haoxuan ; Ye, Chang ; He, Kayla ; Liu, Shun ; Jiang, Bochen ; Ge, Ruiqi ; Gao, Bo[...] N⁶-methyladenosine (m⁶A) plays critical roles in regulating mRNA metabolism. However, comprehensive m⁶A methylomes in different pl [...] 07 June 2024 \| Biochemistry and Molecular Biology; Chemistry \| Article \| Detailed record - Similar records
17.	Multiple Files schultz-et-al-2024-modifications-in-the-t-arm-of-trna-globally-determine-trna-maturation-function-and-cellular-fitness Modifications in the T arm of tRNA globally determine tRNA maturation, function, and cellular fitness Schultz, Sarah K. ; Katanski, Christopher D. ; Halucha, Mateusz ; Peña, Noah ; Fahlman, Ric[...] Almost all elongator tRNAs (Transfer RNAs) harbor 5-methyluridine 54 and pseudouridine 55 in the T arm, generated by the enzymes TrmA and TruB, respectively, in Escherich [...] 18 June 2024 \| Biochemistry and Molecular Biology; Molecular Genetics and Cell Biology \| Article \| Detailed record - Similar records
18.	Multiple Files elife-88737-v1 Epistasis facilitates functional evolution in an ancient transcription factor Metzger, Brian P. H. ; Park, Yeonwoo ; Starr, Tyler N. ; Thornton, Joseph W. A protein’s genetic architecture – the set of causal rules by which its sequence produces its functions – also determines its possible evolutionary trajectories. Pr [...] 20 May 2024 \| Biochemistry and Molecular Biology; Biophysical Sciences; Ecology and Evolution; Genetics, Genomics, and Systems Biology; Human Genetics \| Article \| Detailed record - Similar records
19.	Multiple Files Prediction-of-the-essential-intermolecular-contacts-for-side-binding-of-VASP-on-F-actin Prediction of the essential intermolecular contacts for side-binding of VASP on F-actin Aydin, Fikret ; Katkar, Harshwardhan H. ; Morganthaler, Alisha ; Harker, Alyssa J. ; Kovar, [...] Vasodilator-stimulated phosphoprotein (VASP) family proteins play a crucial role in mediating the actin network architecture in the cytoskeleton. The Ena/VASP homology 2 [...] 22 April 2024 \| Biochemistry and Molecular Biology; Chemistry; Molecular Genetics and Cell Biology \| Article \| Detailed record - Similar records
20.	Multiple Files Functional-protein-dynamics-in-a-crystal Functional protein dynamics in a crystal Klyshko, Eugene ; Kim, Justin Sung-Ho ; McGough, Lauren ; Valeeva, Victoria ; Lee, Ethan ; Rang[...] Proteins are molecular machines and to understand how they work, we need to understand how they move. New pump-probe time-resolved X-ray diffraction methods open up ways [...] 15 April 2024 \| Biochemistry and Molecular Biology; Ecology and Evolution \| Article \| Detailed record - Similar records
21.	Multiple Files RNA-molecules-display-distinctive-organization-at-nuclear-speckles RNA molecules display distinctive organization at nuclear speckles Paul, Sneha ; Arias, Mauricio A. ; Wen, Li ; Liao, Susan E. ; Zhang, Jiacheng ; Wang, Xiaoshu ; Re[...] RNA molecules often play critical roles in assisting the formation of membraneless organelles in eukaryotic cells. Yet, little is known about the organization of RNAs wit [...] 27 March 2024 \| Biochemistry and Molecular Biology; Biological Sciences; Biophysical Sciences; Physics \| Article \| Detailed record - Similar records
22.	Multiple Files Adaptive-biomolecular-condensation-response-is-conserved-across-environmentally-divergent-species An adaptive biomolecular condensation response is conserved across environmentally divergent species Keyport Kik, Samantha ; Christopher, Dana ; Glauninger, Hendrik ; Wong Hickernell, Caitli[...] Cells must sense and respond to sudden maladaptive environmental changes—stresses—to survive and thrive. Across eukaryotes, stresses such as heat shock trigger conser [...] 11 April 2024 \| Biochemistry and Molecular Biology; Biophysical Sciences; Genetics, Genomics, and Systems Biology; Medicine \| Article \| Detailed record - Similar records
23.	Multiple Files How-hydrophobicity-side-chains-and-salt-affect-the-dimensions-of-disordered-proteins How hydrophobicity, side chains, and salt affect the dimensions of disordered proteins Baxa, Michael C. ; Lin, Xiaoxuan ; Mukinay, Cedrick D. ; Chakravarthy, Srinivas ; Sachleben,[...] Despite the generally accepted role of the hydrophobic effect as the driving force for folding, many intrinsically disordered proteins (IDPs), including those with hydrop [...] 12 April 2024 \| Biochemistry and Molecular Biology; Biophysical Sciences \| Article \| Detailed record - Similar records
24.	Multiple Files Structural-basis-for-promiscuity-in-ligand-recognition-by-yjdF-riboswitch Structural basis for promiscuity in ligand recognition by <i>yjdF</i> riboswitch Krochmal, Daniel ; Roman, Christina ; Lewicka, Anna ; Shao, Yaming ; Piccirilli, Joseph A. No abstract 02 April 2024 \| Biochemistry and Molecular Biology; Chemistry \| Article \| Detailed record - Similar records
25.	Multiple Files PRXLife.1.023004 Emergence of Single- versus Multi-State Allostery Rouviere, Eric ; Ranganathan, Rama ; Rivoire, Olivier Several physical mechanisms have been proposed to explain allostery in proteins. They differ by the number of internal states that they assume a protein to occupy, leavin [...] 09 November 2023 \| Biochemistry and Molecular Biology; Biophysical Sciences \| Article \| Detailed record - Similar records

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