Published August 21, 2024
| Version v1
Journal article
Open
Clinical and molecular correlates of tumor aneuploidy in metastatic non-small cell lung cancer
Description
Recent studies have linked elevated tumor aneuploidy to anti-tumor immune suppression and adverse survival following immunotherapy. Herein, we provide supportive evidence for tumor aneuploidy as a biomarker of response to immunotherapy in patients with non-small cell lung cancer (NSCLC). We identify a dose–response relationship between aneuploidy score and patient outcomes. In two independent NSCLC cohorts (n = 659 patients), we demonstrate a novel association between elevated aneuploidy and non-smoking-associated oncogenic driver mutations. Lastly, we report enrichment of TERT amplification and immune-suppressive phenotypes of highly aneuploid NSCLC. Taken together, our findings emphasize a potentially critical role for tumor aneuploidy in guiding immunotherapy treatment strategies.
Data availability
All original data for the SU2C-MARK Foundation cohort are available from the original manuscript's Zenodo repository: https://zenodo.org/records/7849582. All data for the MSK-IMPACT cohort is deposited at the following cBioPortal repository: https://www.cbioportal.org/study/summary?id=tmb_mskcc_2018 and AACR Project GENIE: https://www.synapse.org/#!Synapse:syn7222066/wiki/405659. All modified and/or newly generated data are available at this manuscript's associated Zenodo repository: https://zenodo.org/records/11671610.
All proprietary code necessary to replicate the results and figures in this manuscript are available at this manuscript's associated Zenodo repository: https://zenodo.org/records/11671610.
Files
Clinical-and-molecular-correlates-of-tumor-aneuploidy-in-metastatic-non-small-cell-lung-cancer.pdf
Files
(3.9 MB)
| Name | Size | Download all |
|---|---|---|
|
Article md5:83074df8884ce49f2b40ac36794c7057 |
1.8 MB | Preview Download |
|
md5:a75e35704946384fb8c88116e8d39e99
|
2.1 MB | Preview Download |
Additional details
Identifiers
- DOI
- 10.1038/s41598-024-66062-5
- Other
- oai:uchicago.tind.io:13263
Funding
- Ludwig Cancer Research Foundation
- LUNGevity Foundation
- Career Development Award
- University of Chicago Medicine Comprehensive Cancer Center
- Ullman Scholarship in Translational Cancer Immunology
- University of Chicago Medicine Comprehensive Cancer Center
- Cancer Spotlight Grant
- American Lung Association
- Lung Cancer Discovery Award
- Falk Medical Research Trust
- Catalyst Award
- University of Chicago
- John D. Arnold, MD Scientific Research Prize