Published May 25, 2024 | Version v1
Journal article Open

Interaction of MRI Contrast Agent [Gd(DOTA)]− with Lipid Membranes: A Molecular Dynamics Study

Description

Contrast agents are important imaging probes in clinical MRI, allowing the identification of anatomic changes that otherwise would not be possible. Intensive research on the development of new contrast agents is being made to image specific pathological markers or sense local biochemical changes. The most widely used MRI contrast agents are based on gadolinium(III) complexes. Due to their very high charge density, they have low permeability through tight biological barriers such as the blood-brain barrier, hampering their application in the diagnosis of neurological disorders. In this study, we explore the interaction between the widely used contrast agent [Gd(DOTA)] (Dotarem) and POPC lipid bilayers by means of molecular dynamics simulations. This metal complex is a standard reference where several chemical modifications have been introduced to improve key properties such as bioavailability and targeting. The simulations unveil detailed insights into the agent's interaction with the lipid bilayer, offering perspectives beyond experimental methods. Various properties, including the impact on global and local bilayer properties, were analyzed. As expected, the results indicate a low partition coefficient (KP) and high permeation barrier for this reference compound. Nevertheless, favorable interactions are established with the membrane leading to moderately long residence times. While coordination of one inner-sphere water molecule is maintained for the membrane-associated chelate, the physical-chemical attributes of [Gd(DOTA)] as a MRI contrast agent are affected. Namely, increases in the rotational correlation times and in the residence time of the inner-sphere water are observed, with the former expected to significantly increase the water proton relaxivity. This work establishes a reference framework for the use of simulations to guide the rational design of new contrast agents with improved relaxivity and bioavailability and for the development of liposome-based formulations for use as imaging probes or theranostic agents.

Data availability

All the necessary files to run the simulations performed in this work are also available in the Zenodo repository, together with a full trajectory (https://doi.org/10.5281/zenodo.11179585); other full trajectories are available upon request.

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Additional details

Identifiers

DOI
10.1021/acs.inorgchem.4c00972
Other
oai:uchicago.tind.io:12075

Funding

European Commission
COMPETE2020-Operational Program for Competitiveness and Internationalization European Regional Development Fund
Fundação para a Ciência e Tecnologia
UIDB/00313/2020 <a href="https://doi.org/10.54499/UIDB/00313/2020" target="_blank">https://doi.org/10.54499/UIDB/00313/2020</a>
Fundação para a Ciência e Tecnologia
UIDP/00313/2020 <a href="https://doi.org/10.54499/UIDB/00313/2020" target="_blank">https://doi.org/10.54499/UIDB/00313/2020</a>
Fundação para a Ciência e Tecnologia
MCTES and EU through FSE through Programa Operacional Regional do Centro
Fulbright Portugal
scholarship
European Commission
Programa Operacional Regional do Centro European Social Fund

UChicago Information

Division(s)
Physical Sciences Division
Department(s)
Chemistry
Center(s) or Institute(s)
Chicago Center for Theoretical Chemistry, Institute for Biophysical Dynamics, James Franck Institute