Published January 3, 2024
| Version v1
Journal article
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The logic of recurrent circuits in the primary visual cortex
Creators
- 1. Rutgers University
- 2. University of California, Berkeley
- 3. University of Chicago
- 4. Stanford University
Description
Recurrent cortical activity sculpts visual perception by refining, amplifying or suppressing visual input. However, the rules that govern the influence of recurrent activity remain enigmatic. We used ensemble-specific two-photon optogenetics in the mouse visual cortex to isolate the impact of recurrent activity from external visual input. We found that the spatial arrangement and the visual feature preference of the stimulated ensemble and the neighboring neurons jointly determine the net effect of recurrent activity. Photoactivation of these ensembles drives suppression in all cells beyond 30 µm but uniformly drives activation in closer similarly tuned cells. In nonsimilarly tuned cells, compact, cotuned ensembles drive net suppression, while diffuse, cotuned ensembles drive activation. Computational modeling suggests that highly local recurrent excitatory connectivity and selective convergence onto inhibitory neurons explain these effects. Our findings reveal a straightforward logic in which space and feature preference of cortical ensembles determine their impact on local recurrent activity.
Data availability
The compressed data to reproduce the key figures of the paper can be found on the GitHub repository (https://github.com/gregoryhandy/Logic_of_Recurrent_Circuits).
Code to reproduce the key figures of the paper can be found on the GitHub repository (https://github.com/gregoryhandy/Logic_of_Recurrent_Circuits). Additional code used for analysis can be found at: https://github.com/willyh101/100spikesAnalysis. Code used for online analysis can be found at https://github.com/willyh101/live2p.
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Additional details
Identifiers
- DOI
- 10.1038/s41593-023-01510-5
- Other
- oai:uchicago.tind.io:10326
Funding
- National Institutes of Health
- U19NS107613
- National Institutes of Health
- R01EY023756
- National Institutes of Health
- RF1MH120680
- National Institutes of Health
- UF1NS107574
- New York Stem Cell Robertson Fellowship
- Chan Zuckerberg Biohub
- Investigator Award
- National Institutes of Health
- R01EB026953
- Simons Foundation
- National Science Foundation
- Fellowship
- Swartz Foundation
- Fellowship for Theory in Neuroscience
- Burroughs Wellcome Fund
- Career Award at the Scientific Interface
- National Institutes of Health
- F31EY031977
- National Institutes of Health
- R00EY029758
- Whitehall Foundation
- 2023-05-40
- Simons Foundation
- collaboration on the global brain fellowship