Published June 14, 2023 | Version v1
Journal article Open

The structure of phosphatidylinositol remodeling MBOAT7 reveals its catalytic mechanism and enables inhibitor identification

  • 1. Harvard University
  • 2. Texas A&M University
  • 3. University of Chicago
  • 4. Memorial Sloan Kettering Cancer Center

Description

Cells remodel glycerophospholipid acyl chains via the Lands cycle to adjust membrane properties. Membrane-bound O-acyltransferase (MBOAT) 7 acylates lyso-phosphatidylinositol (lyso-PI) with arachidonyl-CoA. MBOAT7 mutations cause brain developmental disorders, and reduced expression is linked to fatty liver disease. In contrast, increased MBOAT7 expression is linked to hepatocellular and renal cancers. The mechanistic basis of MBOAT7 catalysis and substrate selectivity are unknown. Here, we report the structure and a model for the catalytic mechanism of human MBOAT7. Arachidonyl-CoA and lyso-PI access the catalytic center through a twisted tunnel from the cytosol and lumenal sides, respectively. N-terminal residues on the ER lumenal side determine phospholipid headgroup selectivity: swapping them between MBOATs 1, 5, and 7 converts enzyme specificity for different lyso-phospholipids. Finally, the MBOAT7 structure and virtual screening enabled identification of small-molecule inhibitors that may serve as lead compounds for pharmacologic development.

Data availability

The three-dimensional cryo-EM density maps have been deposited into the Electron Microscopy Data Bank under accession numbers EMD-28552. The coordinates are deposited into the Protein Data Bank with accession number 8ERC. This study also cited published structures 7F3X (chicken MBOAT5 in complex with lyso-PC) and 7F40 (chicken MBOAT5 in complex with arachidonyl-CoA). The raw TLC, gel and blot data generated in this study are provided in the Source Data file. Source data are provided with this paper.

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Additional details

Identifiers

DOI
10.1038/s41467-023-38932-5
Other
oai:uchicago.tind.io:6392

Funding

National Science Foundation
DMR-182869
Unknown funder
R01GM063796
Unknown funder
R01GM141050
Howard Hughes Medical Institute

UChicago Information

Division(s)
Physical Sciences Division, Pritzker School of Molecular Engineering
Department(s)
Chemistry
Center(s) or Institute(s)
Chicago Center for Theoretical Chemistry, James Franck Institute