Published December 22, 2025 | Version v1
Journal article

Lipid-packing defects are sufficient to modulate membrane insertion and the bound state of α-synuclein

Description

α-Synuclein is an intrinsically disordered neuronal protein that forms an amphipathic helix when it peripherally binds to lipid membranes. This membrane interaction is integral to the protein's function but is also associated with its dysfunction. Numerous membrane parameters have been identified to promote α-synuclein binding such as high negative charge and low lipid-packing density, which corresponds to greater lipid-packing defects—increased spacing between lipids conferred through curvature, unsaturation, or small headgroups. Despite α-synuclein's established preference for negatively charged membranes with packing defects, the specific effects that each parameter has on this interaction remains underexplored. With increasing links between α-synuclein-associated diseases and changes in lipid composition, it has become more important to delineate how changes in membrane parameters affect α-synuclein membrane-interactions. Here, we demonstrate using tryptophan fluorescence spectroscopy that while net negative charge does increase the density of α-synuclein bound to a membrane, lipid-packing defects alone are sufficient for α-synuclein to insert. Not only do our results establish a lipid-packing defect requirement for α-synuclein, but they also reveal a packing defect-dependent shift in the ensemble of binding modes of the protein favoring the insertion of the end of its binding domain—a binding mode which has previously been linked to disease mutants of the protein. Overall, this work establishes the significance of lipid-packing defects in contrast to net negative charge for α-synuclein–membrane binding and proposes a lipid-compositionally dependent shift in α-synuclein's ensemble of bound conformations, which may be relevant for the protein's function and dysfunction.

Data availability

The raw tryptophan fluorescence data will be available upon request. Due to the data size, it is impractical to upload it to a repository. Any data requests can be directed to the corresponding author. All other data are included in the manuscript and/or SI Appendix.

Additional details

Identifiers

DOI
10.1073/pnas.2419823122
Other
oai:uchicago.tind.io:16755

Funding

U.S. National Science Foundation
MCB-1950525
National Institutes of Health
R01 AI155984

UChicago Information

Division(s)
Physical Sciences Division
Department(s)
Biochemistry and Molecular Biology, Chemistry