Published July 8, 2024 | Version v1
Journal article Open

High-throughput screen identifies non inflammatory small molecule inducers of trained immunity

Description

Trained immunity is characterized by epigenetic and metabolic reprogramming in response to specific stimuli. This rewiring can result in increased cytokine and effector responses to pathogenic challenges, providing nonspecific protection against disease. It may also improve immune responses to established immunotherapeutics and vaccines. Despite its promise for next-generation therapeutic design, most current understanding and experimentation is conducted with complex and heterogeneous biologically derived molecules, such as β-glucan or the Bacillus Calmette-Guérin (BCG) vaccine. This limited collection of training compounds also limits the study of the genes most involved in training responses as each molecule has both training and nontraining effects. Small molecules with tunable pharmacokinetics and delivery modalities would both assist in the study of trained immunity and its future applications. To identify small molecule inducers of trained immunity, we screened a library of 2,000 drugs and drug-like compounds. Identification of well-defined compounds can improve our understanding of innate immune memory and broaden the scope of its clinical applications. We identified over two dozen small molecules in several chemical classes that induce a training phenotype in the absence of initial immune activation—a current limitation of reported inducers of training. A surprising result was the identification of glucocorticoids, traditionally considered immunosuppressive, providing an unprecedented link between glucocorticoids and trained innate immunity. We chose seven of these top candidates to characterize and establish training activity in vivo. In this work, we expand the number of compounds known to induce trained immunity, creating alternative avenues for studying and applying innate immune training.

Data availability

ATAC sequencing data have been deposited in GEO (GSE270608) (60).

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Additional details

Identifiers

DOI
10.1073/pnas.2400413121
Other
oai:uchicago.tind.io:12911

Funding

National Science Foundation
Graduate Research Fellowship Program
National Science Foundation
NSF 2140001
National Institute of Allergy and Infectious Diseases
Discovery of Adjuvant Program
Defense Threat Reduction Agency
HDTRA11810052
National Institutes of Health
R01-GM134376
University of Chicago
Digestive Diseases Research Core Center
National Institute of Diabetes and Digestive and Kidney Diseases
P30 DK042086

UChicago Information

Division(s)
Pritzker School of Molecular Engineering, The College
Department(s)
Biological Sciences