Modeling robust COVID-19 intensive care unit occupancy thresholds for imposing mitigation to prevent exceeding capacities
Creators
- 1. Northwestern University
- 2. University of Michigan
- 3. University of Chicago
- 4. Illinois Department of Public Health
Description
In non-pharmaceutical management of COVID-19, occupancy of intensive care units (ICU) is often used as an indicator to inform when to intensify mitigation and thus reduce SARS-CoV-2 transmission, strain on ICUs, and deaths. However, ICU occupancy thresholds at which action should be taken are often selected arbitrarily. We propose a quantitative approach using mathematical modeling to identify ICU occupancy thresholds at which mitigation should be triggered to avoid exceeding the ICU capacity available for COVID-19 patients and demonstrate this approach for the United States city of Chicago. We used a stochastic compartmental model to simulate SARS-CoV-2 transmission and disease progression, including critical cases that would require intensive care. We calibrated the model using daily COVID-19 ICU and hospital census data between March and August 2020. We projected various possible ICU occupancy trajectories from September 2020 to May 2021 with two possible levels of transmission increase and uncertainty in core model parameters. The effect of combined mitigation measures was modeled as a decrease in the transmission rate that took effect when projected ICU occupancy reached a specified threshold. We found that mitigation did not immediately eliminate the risk of exceeding ICU capacity. Delaying action by 7 days increased the probability of exceeding ICU capacity by 10–60% and this increase could not be counteracted by stronger mitigation. Even under modest transmission increase, a threshold occupancy no higher than 60% was required when mitigation reduced the reproductive number Rt to just below 1. At higher transmission increase, a threshold of at most 40% was required with mitigation that reduced Rt below 0.75 within the first two weeks after mitigation. Our analysis demonstrates a quantitative approach for the selection of ICU occupancy thresholds that considers parameter uncertainty and compares relevant mitigation and transmission scenarios. An appropriate threshold will depend on the location, number of ICU beds available for COVID-19, available mitigation options, feasible mitigation strengths, and tolerated durations of intensified mitigation.
Data availability
The simulation and analysis code are publicly available on GitHub under https://github.com/numalariamodeling/ICUtrigger_covid_chicago_paper_2022. The simulation outputs are stored on Zenodo with DOI:(10.5281/zenodo.5018779). The COVID-19 transmission model is maintained under https://github.com/numalariamodeling/covid-chicago. Public data is available on the IDPH website (https://dph.illinois.gov/covid19). Illinois hospital census data and I-NEDSS data can be received from IDPH upon reasonable request using the data request form (https://dph.illinois.gov/content/dam/soi/en/web/idph/files/forms/formsoppsdischarge-data-request-form.pdf). All other data are publicly available as mentioned in the text.Files
journal.pgph.0000308.pdf
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Additional details
Identifiers
- DOI
- 10.1371/journal.pgph.0000308
- Other
- oai:uchicago.tind.io:5886
Related works
- Cites
- https://doi.org/10.1101/2021.06.27.21259530 (URL)
Funding
- MIDAS
- rapid response grant
- NUCATS
- COVID-19 rapid response grant
- BMGF
- INV-002092
- NIGMS
- T32 GM008449
- NIGMS
- T32 GM008152