Published August 18, 2014 | Version v1
Journal article Open

A RESTful API for Accessing Microbial Community Data for MG-RAST

  • 1. University of Chicago
  • 2. UChicago Research Bangladesh
  • 3. International Centre for Diarrhoeal Disease Research
  • 4. Columbia University
  • 5. University of North Carolina

Description

Many health outcomes are influenced by a person's body mass index, as well as by the trajectory of body mass index through a lifetime. Although previous research has established that body mass index related traits are influenced by genetics, the relationship between these traits and genetics has not been well characterized in people of South Asian ancestry. To begin to characterize this relationship, we analyzed the association between common genetic variation and five phenotypes related to body mass index in a population-based sample of 5,354 Bangladeshi adults. We discovered a significant association between SNV rs347313 (intron of NOS1AP) and change in body mass index in women over two years. In a linear mixed-model, the G allele was associated with an increase of 0.25 kg/m2 in body mass index over two years (p-value of 2.3·10−8). We also estimated the heritability of these phenotypes from our genotype data. We found significant estimates of heritability for all of the body mass index-related phenotypes. Our study evaluated the genetic determinants of body mass index related phenotypes for the first time in South Asians. The results suggest that these phenotypes are heritable and some of this heritability is driven by variation that differs from those previously reported. We also provide evidence that the genetic etiology of body mass index related traits may differ by ancestry, sex, and environment, and consequently that these factors should be considered when assessing the genetic determinants of the risk of body mass index-related disease.

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Additional details

Identifiers

DOI
10.1371/journal.pone.0105062
Other
oai:uchicago.tind.io:11091

Funding

National Institutes of Health
RO1CA107431
National Institutes of Health
P42ES10349
University of Chicago
Nancy Mollin Michael endowment

UChicago Information

Division(s)
Biological Sciences Division
Department(s)
Public Health Sciences